Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Gm9996-201ENSMUST00000070359 913 ntBASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Znf541Q0GGX2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Olfr582-201ENSMUST00000098212 960 ntBASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Znf541Q0GGX2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm24830-201ENSMUST00000102024 166 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm17376-201ENSMUST00000166016 84 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm25890-201ENSMUST00000177643 165 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm22614-201ENSMUST00000178300 165 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm27046-201ENSMUST00000182160 463 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm22042-201ENSMUST00000082989 165 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm26232-201ENSMUST00000083360 166 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gm26110-201ENSMUST00000083971 165 ntBASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Znf541Q0GGX2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Gm6963-201ENSMUST00000147879 379 ntBASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Znf541Q0GGX2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms