Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.72□□□□□ -0.69
Tff1Q08423 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.72□□□□□ -0.69
Tff1Q08423 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 Mir7221-201ENSMUST00000184009 72 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm5161-201ENSMUST00000075243 853 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tff1Q08423 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tff1Q08423 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tff1Q08423 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.72□□□□□ -0.69
Tff1Q08423 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tff1Q08423 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tff1Q08423 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.71□□□□□ -0.69
Tff1Q08423 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.71□□□□□ -0.69
Tff1Q08423 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.71□□□□□ -0.69
Tff1Q08423 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tff1Q08423 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.71□□□□□ -0.69
Tff1Q08423 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tff1Q08423 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tff1Q08423 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tff1Q08423 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tff1Q08423 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Tff1Q08423 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tff1Q08423 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Tff1Q08423 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tff1Q08423 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tff1Q08423 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms