Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Gm12291-201ENSMUST00000121627 311 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 Gm7809-201ENSMUST00000153199 742 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox4Q06831 Gm43438-201ENSMUST00000198133 379 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox4Q06831 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sox4Q06831 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sox4Q06831 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 Gm10478-201ENSMUST00000084451 396 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sox4Q06831 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox4Q06831 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sox4Q06831 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox4Q06831 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.67□□□□□ -0.38
Sox4Q06831 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox4Q06831 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.66□□□□□ -0.38
Sox4Q06831 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.66□□□□□ -0.38
Sox4Q06831 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.66□□□□□ -0.38
Sox4Q06831 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Sox4Q06831 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.66□□□□□ -0.38
Sox4Q06831 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.66□□□□□ -0.38
Sox4Q06831 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.66□□□□□ -0.38
Sox4Q06831 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Gm9823-201ENSMUST00000051212 327 ntBASIC12.66□□□□□ -0.38
Sox4Q06831 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.66□□□□□ -0.38
Sox4Q06831 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox4Q06831 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox4Q06831 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox4Q06831 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox4Q06831 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sox4Q06831 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Sox4Q06831 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Sox4Q06831 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms