Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a1Q04857 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a1Q04857 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a1Q04857 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a1Q04857 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.23□□□□□ -0.13
Col6a1Q04857 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Gm32025-201ENSMUST00000217960 307 ntBASIC14.23□□□□□ -0.13
Col6a1Q04857 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.23□□□□□ -0.13
Col6a1Q04857 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a1Q04857 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col6a1Q04857 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm12502-201ENSMUST00000120197 444 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm27438-201ENSMUST00000183480 110 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm44405-201ENSMUST00000198952 126 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a1Q04857 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.22□□□□□ -0.13
Col6a1Q04857 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a1Q04857 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a1Q04857 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a1Q04857 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col6a1Q04857 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Col6a1Q04857 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.21□□□□□ -0.13
Col6a1Q04857 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm13813-201ENSMUST00000120998 787 ntBASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm2546-201ENSMUST00000182630 991 ntBASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm44262-201ENSMUST00000204969 372 ntBASIC14.21□□□□□ -0.13
Col6a1Q04857 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm8385-201ENSMUST00000058999 643 ntBASIC14.21□□□□□ -0.13
Col6a1Q04857 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col6a1Q04857 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a1Q04857 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms