Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm4768-201ENSMUST00000206199 686 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm45880-201ENSMUST00000213041 853 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.19□□□□□ -0.46
Nkx3-2P97503 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx3-2P97503 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Gm8805-201ENSMUST00000117848 313 ntBASIC12.18□□□□□ -0.46
Nkx3-2P97503 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Gm43179-201ENSMUST00000198797 275 ntBASIC12.18□□□□□ -0.46
Nkx3-2P97503 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx3-2P97503 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.18□□□□□ -0.46
Nkx3-2P97503 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx3-2P97503 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.17□□□□□ -0.46
Nkx3-2P97503 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms