Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Npas1P97459 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Npas1P97459 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.82□□□□□ -0.68
Npas1P97459 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Npas1P97459 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.82□□□□□ -0.68
Npas1P97459 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Npas1P97459 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Npas1P97459 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.81□□□□□ -0.68
Npas1P97459 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.81□□□□□ -0.68
Npas1P97459 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.81□□□□□ -0.68
Npas1P97459 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Npas1P97459 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Npas1P97459 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Npas1P97459 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Npas1P97459 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Npas1P97459 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Npas1P97459 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.8□□□□□ -0.68
Npas1P97459 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
Npas1P97459 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms