Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps45P97390 Gm43133-201ENSMUST00000197472 463 ntBASIC13.33□□□□□ -0.28
Vps45P97390 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps45P97390 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.33□□□□□ -0.28
Vps45P97390 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Vps45P97390 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps45P97390 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps45P97390 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps45P97390 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Mir686-201ENSMUST00000102174 109 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vps45P97390 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps45P97390 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps45P97390 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Gm11793-201ENSMUST00000120433 981 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps45P97390 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps45P97390 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps45P97390 Gm6458-201ENSMUST00000211573 635 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Cts7-204ENSMUST00000225321 1257 ntBASIC13.32□□□□□ -0.28
Vps45P97390 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Snora73a-201ENSMUST00000082453 205 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Vps45P97390 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps45P97390 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vps45P97390 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.32□□□□□ -0.28
Vps45P97390 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vps45P97390 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Vps45P97390 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps45P97390 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps45P97390 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps45P97390 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps45P97390 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps45P97390 Gm37922-201ENSMUST00000195596 455 ntBASIC13.31□□□□□ -0.28
Vps45P97390 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.31□□□□□ -0.28
Vps45P97390 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.31□□□□□ -0.28
Vps45P97390 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps45P97390 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vps45P97390 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Vps45P97390 Gm10268-201ENSMUST00000085340 555 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms