Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Gm12176-201ENSMUST00000121420 875 ntBASIC14.1□□□□□ -0.15
Lig3P97386 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.1□□□□□ -0.15
Lig3P97386 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.1□□□□□ -0.15
Lig3P97386 Gm29396-201ENSMUST00000185659 716 ntBASIC14.1□□□□□ -0.15
Lig3P97386 Gm42550-201ENSMUST00000201553 960 ntBASIC14.1□□□□□ -0.15
Lig3P97386 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.1□□□□□ -0.15
Lig3P97386 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.1□□□□□ -0.15
Lig3P97386 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lig3P97386 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lig3P97386 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.1□□□□□ -0.15
Lig3P97386 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lig3P97386 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lig3P97386 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.09□□□□□ -0.15
Lig3P97386 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Lig3P97386 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.09□□□□□ -0.15
Lig3P97386 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lig3P97386 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.09□□□□□ -0.15
Lig3P97386 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.09□□□□□ -0.15
Lig3P97386 Gm43138-201ENSMUST00000199123 708 ntBASIC14.09□□□□□ -0.15
Lig3P97386 Nsd1-205ENSMUST00000224693 852 ntBASIC14.09□□□□□ -0.15
Lig3P97386 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.09□□□□□ -0.15
Lig3P97386 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Lig3P97386 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lig3P97386 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.09□□□□□ -0.15
Lig3P97386 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.09□□□□□ -0.15
Lig3P97386 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lig3P97386 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lig3P97386 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lig3P97386 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lig3P97386 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lig3P97386 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lig3P97386 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.08□□□□□ -0.15
Lig3P97386 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lig3P97386 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.08□□□□□ -0.16
Lig3P97386 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.08□□□□□ -0.16
Lig3P97386 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lig3P97386 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.08□□□□□ -0.16
Lig3P97386 Gm22323-201ENSMUST00000103832 109 ntBASIC14.08□□□□□ -0.16
Lig3P97386 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Gm2383-201ENSMUST00000181461 807 ntBASIC14.08□□□□□ -0.16
Lig3P97386 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.08□□□□□ -0.16
Lig3P97386 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.08□□□□□ -0.16
Lig3P97386 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Gm5363-201ENSMUST00000211927 938 ntBASIC14.08□□□□□ -0.16
Lig3P97386 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Gm10268-201ENSMUST00000085340 555 ntBASIC14.08□□□□□ -0.16
Lig3P97386 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.08□□□□□ -0.16
Lig3P97386 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lig3P97386 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lig3P97386 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lig3P97386 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lig3P97386 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lig3P97386 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lig3P97386 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lig3P97386 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lig3P97386 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lig3P97386 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms