Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx2-3P97334 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx2-3P97334 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx2-3P97334 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx2-3P97334 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.08■□□□□ 0.16
Nkx2-3P97334 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm9022-201ENSMUST00000182482 992 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm18304-201ENSMUST00000189162 546 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm45598-202ENSMUST00000210719 986 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm19994-201ENSMUST00000217086 586 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Nkx2-3P97334 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.07■□□□□ 0.16
Nkx2-3P97334 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Gm20614-201ENSMUST00000177106 632 ntBASIC16.06■□□□□ 0.16
Nkx2-3P97334 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Gm42997-202ENSMUST00000200321 985 ntBASIC16.06■□□□□ 0.16
Nkx2-3P97334 AU022133-201ENSMUST00000200601 873 ntBASIC16.06■□□□□ 0.16
Nkx2-3P97334 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx2-3P97334 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.05■□□□□ 0.16
Nkx2-3P97334 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm27530-201ENSMUST00000184096 98 ntBASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Gm44882-201ENSMUST00000205702 802 ntBASIC16.05■□□□□ 0.16
Nkx2-3P97334 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.05■□□□□ 0.16
Nkx2-3P97334 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms