Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcdP82347 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
SgcdP82347 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.99□□□□□ -0.49
SgcdP82347 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SgcdP82347 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SgcdP82347 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SgcdP82347 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcdP82347 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcdP82347 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcdP82347 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SgcdP82347 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
SgcdP82347 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SgcdP82347 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SgcdP82347 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Mir874-201ENSMUST00000104769 76 ntBASIC11.98□□□□□ -0.49
SgcdP82347 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
SgcdP82347 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.98□□□□□ -0.49
SgcdP82347 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.98□□□□□ -0.49
SgcdP82347 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.98□□□□□ -0.49
SgcdP82347 Gm18018-201ENSMUST00000198273 408 ntBASIC11.98□□□□□ -0.49
SgcdP82347 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.98□□□□□ -0.49
SgcdP82347 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SgcdP82347 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SgcdP82347 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.98□□□□□ -0.49
SgcdP82347 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SgcdP82347 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcdP82347 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SgcdP82347 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SgcdP82347 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcdP82347 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcdP82347 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.97□□□□□ -0.49
SgcdP82347 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcdP82347 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.97□□□□□ -0.49
SgcdP82347 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.97□□□□□ -0.49
SgcdP82347 Gm15824-201ENSMUST00000119516 955 ntBASIC11.97□□□□□ -0.49
SgcdP82347 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Gm8602-201ENSMUST00000184045 607 ntBASIC11.97□□□□□ -0.49
SgcdP82347 Gm9908-201ENSMUST00000211534 448 ntBASIC11.97□□□□□ -0.49
SgcdP82347 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcdP82347 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcdP82347 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcdP82347 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcdP82347 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SgcdP82347 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcdP82347 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SgcdP82347 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms