Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CiitaP79621 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CiitaP79621 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CiitaP79621 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CiitaP79621 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.94□□□□□ -0.18
CiitaP79621 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.94□□□□□ -0.18
CiitaP79621 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.94□□□□□ -0.18
CiitaP79621 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CiitaP79621 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.94□□□□□ -0.18
CiitaP79621 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.94□□□□□ -0.18
CiitaP79621 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.94□□□□□ -0.18
CiitaP79621 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.94□□□□□ -0.18
CiitaP79621 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CiitaP79621 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.94□□□□□ -0.18
CiitaP79621 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.93□□□□□ -0.18
CiitaP79621 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CiitaP79621 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Grk6-205ENSMUST00000224653 2976 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CiitaP79621 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.93□□□□□ -0.18
CiitaP79621 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gm11222-201ENSMUST00000119005 738 ntBASIC13.93□□□□□ -0.18
CiitaP79621 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Gm44364-201ENSMUST00000198368 141 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gm9257-201ENSMUST00000221254 232 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CiitaP79621 Gm22058-201ENSMUST00000083393 310 ntBASIC13.93□□□□□ -0.18
CiitaP79621 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CiitaP79621 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CiitaP79621 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CiitaP79621 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.92□□□□□ -0.18
CiitaP79621 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.92□□□□□ -0.18
CiitaP79621 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.92□□□□□ -0.18
CiitaP79621 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CiitaP79621 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.92□□□□□ -0.18
CiitaP79621 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms