Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.29□□□□□ -0.28
Smad1P70340 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Smad1P70340 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.29□□□□□ -0.28
Smad1P70340 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Gm24447-201ENSMUST00000083977 338 ntBASIC13.29□□□□□ -0.28
Smad1P70340 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smad1P70340 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smad1P70340 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smad1P70340 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smad1P70340 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smad1P70340 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.28□□□□□ -0.28
Smad1P70340 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Smad1P70340 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.28□□□□□ -0.28
Smad1P70340 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.28□□□□□ -0.28
Smad1P70340 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.28□□□□□ -0.28
Smad1P70340 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smad1P70340 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smad1P70340 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Smad1P70340 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smad1P70340 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Gm27572-201ENSMUST00000183702 255 ntBASIC13.27□□□□□ -0.29
Smad1P70340 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.27□□□□□ -0.29
Smad1P70340 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.27□□□□□ -0.29
Smad1P70340 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.27□□□□□ -0.29
Smad1P70340 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smad1P70340 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smad1P70340 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smad1P70340 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.27□□□□□ -0.29
Smad1P70340 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.27□□□□□ -0.29
Smad1P70340 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.27□□□□□ -0.29
Smad1P70340 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms