Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Hmgb1P63158 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.19□□□□□ -0.14
Hmgb1P63158 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.18□□□□□ -0.14
Hmgb1P63158 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.18□□□□□ -0.14
Hmgb1P63158 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.18□□□□□ -0.14
Hmgb1P63158 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb1P63158 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.18□□□□□ -0.14
Hmgb1P63158 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb1P63158 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.17□□□□□ -0.14
Hmgb1P63158 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Gm44745-201ENSMUST00000206563 2723 ntBASIC14.17□□□□□ -0.14
Hmgb1P63158 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.17□□□□□ -0.14
Hmgb1P63158 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.17□□□□□ -0.14
Hmgb1P63158 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hmgb1P63158 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.17□□□□□ -0.14
Hmgb1P63158 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb1P63158 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb1P63158 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms