Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ybx1P62960 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Ybx1P62960 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Gm11930-201ENSMUST00000117788 190 ntBASIC13.17□□□□□ -0.3
Ybx1P62960 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ybx1P62960 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.17□□□□□ -0.3
Ybx1P62960 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.17□□□□□ -0.3
Ybx1P62960 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ybx1P62960 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ybx1P62960 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ybx1P62960 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ybx1P62960 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.16□□□□□ -0.3
Ybx1P62960 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gm14277-201ENSMUST00000121195 360 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.16□□□□□ -0.3
Ybx1P62960 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.16□□□□□ -0.3
Ybx1P62960 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gm8885-201ENSMUST00000189382 598 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Gm18212-201ENSMUST00000211678 889 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Gm8712-201ENSMUST00000221090 701 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Nsd1-205ENSMUST00000224693 852 ntBASIC13.16□□□□□ -0.3
Ybx1P62960 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ybx1P62960 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms