Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39P62892 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.17□□□□□ -0.94
Rpl39P62892 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.16□□□□□ -0.94
Rpl39P62892 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.16□□□□□ -0.94
Rpl39P62892 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.16□□□□□ -0.94
Rpl39P62892 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.16□□□□□ -0.94
Rpl39P62892 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm3436-201ENSMUST00000179930 840 ntBASIC9.16□□□□□ -0.94
Rpl39P62892 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm43703-201ENSMUST00000200523 763 ntBASIC9.16□□□□□ -0.94
Rpl39P62892 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Rpl39P62892 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Rpl39P62892 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Rpl39P62892 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.16□□□□□ -0.94
Rpl39P62892 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39P62892 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.15□□□□□ -0.94
Rpl39P62892 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rpl39P62892 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Daam2-202ENSMUST00000224595 1926 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Rpl39P62892 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 Gm29608-201ENSMUST00000190444 463 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Rpl39P62892 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Gm17795-201ENSMUST00000214505 757 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.15□□□□□ -0.94
Rpl39P62892 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39P62892 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.15□□□□□ -0.94
Rpl39P62892 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms