Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm11803-201ENSMUST00000119966 444 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Gm12490-201ENSMUST00000120255 560 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Gm2231-201ENSMUST00000125661 612 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Lsm6P62313 Gm8810-201ENSMUST00000172895 754 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Gm37497-201ENSMUST00000195830 798 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.32□□□□□ -0.6
Lsm6P62313 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.32□□□□□ -0.6
Lsm6P62313 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 Gm8805-201ENSMUST00000117848 313 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Gm14921-201ENSMUST00000118643 908 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Gm12138-201ENSMUST00000122180 951 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 Gm27486-201ENSMUST00000184923 80 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.31□□□□□ -0.6
Lsm6P62313 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm6P62313 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm6P62313 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm6P62313 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.3□□□□□ -0.6
Lsm6P62313 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.3□□□□□ -0.6
Lsm6P62313 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.3□□□□□ -0.6
Lsm6P62313 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lsm6P62313 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm6P62313 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.3□□□□□ -0.6
Lsm6P62313 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms