Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm6244-201ENSMUST00000178732 841 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm28693-202ENSMUST00000190758 331 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.15□□□□□ -0.3
Tubgcp3P58854 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubgcp3P58854 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Tubgcp3P58854 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tubgcp3P58854 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tubgcp3P58854 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.15□□□□□ -0.31
Tubgcp3P58854 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tubgcp3P58854 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Tubgcp3P58854 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tubgcp3P58854 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm8213-201ENSMUST00000118191 441 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm10156-201ENSMUST00000122364 462 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm5356-201ENSMUST00000093326 615 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubgcp3P58854 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.13□□□□□ -0.31
Tubgcp3P58854 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Gm12490-201ENSMUST00000120255 560 ntBASIC13.13□□□□□ -0.31
Tubgcp3P58854 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.13□□□□□ -0.31
Tubgcp3P58854 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubgcp3P58854 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms