Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.53□□□□□ -0.56
Cldn18P56857 AY702102-202ENSMUST00000194651 1173 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.53□□□□□ -0.56
Cldn18P56857 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.53□□□□□ -0.56
Cldn18P56857 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.53□□□□□ -0.56
Cldn18P56857 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.53□□□□□ -0.56
Cldn18P56857 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Cldn18P56857 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.53□□□□□ -0.56
Cldn18P56857 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cldn18P56857 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cldn18P56857 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Cldn18P56857 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.52□□□□□ -0.56
Cldn18P56857 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cldn18P56857 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.52□□□□□ -0.56
Cldn18P56857 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cldn18P56857 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Cldn18P56857 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cldn18P56857 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.52□□□□□ -0.57
Cldn18P56857 Gm5370-201ENSMUST00000187187 574 ntBASIC11.52□□□□□ -0.57
Cldn18P56857 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.52□□□□□ -0.57
Cldn18P56857 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.52□□□□□ -0.57
Cldn18P56857 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cldn18P56857 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cldn18P56857 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.52□□□□□ -0.57
Cldn18P56857 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cldn18P56857 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cldn18P56857 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cldn18P56857 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.51□□□□□ -0.57
Cldn18P56857 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.51□□□□□ -0.57
Cldn18P56857 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cldn18P56857 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.51□□□□□ -0.57
Cldn18P56857 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Cldn18P56857 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cldn18P56857 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn18P56857 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms