Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.88□□□□□ -0.35
Fdft1P53798 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Fdft1P53798 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.88□□□□□ -0.35
Fdft1P53798 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Fdft1P53798 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.88□□□□□ -0.35
Fdft1P53798 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 Gm6745-201ENSMUST00000199216 526 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.88□□□□□ -0.35
Fdft1P53798 Gm9908-201ENSMUST00000211534 448 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Gm18473-201ENSMUST00000220543 868 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Fdft1P53798 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Fdft1P53798 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Fdft1P53798 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Fdft1P53798 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Fdft1P53798 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Fdft1P53798 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Fdft1P53798 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.87□□□□□ -0.35
Fdft1P53798 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.87□□□□□ -0.35
Fdft1P53798 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.87□□□□□ -0.35
Fdft1P53798 Gm16202-201ENSMUST00000117532 544 ntBASIC12.87□□□□□ -0.35
Fdft1P53798 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Fdft1P53798 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Fdft1P53798 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.87□□□□□ -0.35
Fdft1P53798 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.87□□□□□ -0.35
Fdft1P53798 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fdft1P53798 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.87□□□□□ -0.35
Fdft1P53798 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Fdft1P53798 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fdft1P53798 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fdft1P53798 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fdft1P53798 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Gm11918-201ENSMUST00000121660 179 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms