Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Gm8762-201ENSMUST00000193486 339 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox3P53784 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.36□□□□□ -0.43
Sox3P53784 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox3P53784 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox3P53784 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox3P53784 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox3P53784 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm37497-201ENSMUST00000195830 798 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm42997-202ENSMUST00000200321 985 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Gm7046-201ENSMUST00000221351 977 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox3P53784 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox3P53784 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.35□□□□□ -0.43
Sox3P53784 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.35□□□□□ -0.43
Sox3P53784 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.34□□□□□ -0.43
Sox3P53784 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox3P53784 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.34□□□□□ -0.43
Sox3P53784 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.34□□□□□ -0.43
Sox3P53784 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Gm24990-201ENSMUST00000157406 323 ntBASIC12.34□□□□□ -0.43
Sox3P53784 Gm7029-201ENSMUST00000173226 450 ntBASIC12.34□□□□□ -0.43
Sox3P53784 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.34□□□□□ -0.43
Sox3P53784 Gm43947-201ENSMUST00000203019 959 ntBASIC12.34□□□□□ -0.43
Sox3P53784 Itm2b-204ENSMUST00000228637 783 ntBASIC12.34□□□□□ -0.43
Sox3P53784 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms