Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atp6v1aP50516 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Gm29787-201ENSMUST00000222129 849 ntBASIC15.49■□□□□ 0.07
Atp6v1aP50516 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp6v1aP50516 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.48■□□□□ 0.07
Atp6v1aP50516 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm20426-201ENSMUST00000173657 440 ntBASIC15.48■□□□□ 0.07
Atp6v1aP50516 Mir7221-201ENSMUST00000184009 72 ntBASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.48■□□□□ 0.07
Atp6v1aP50516 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.48■□□□□ 0.07
Atp6v1aP50516 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Atp6v1aP50516 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.47■□□□□ 0.07
Atp6v1aP50516 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.47■□□□□ 0.07
Atp6v1aP50516 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp6v1aP50516 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms