Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm23363-201ENSMUST00000175024 79 ntBASIC13.61□□□□□ -0.23
Shmt1P50431 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Shmt1P50431 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.61□□□□□ -0.23
Shmt1P50431 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shmt1P50431 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shmt1P50431 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Shmt1P50431 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Shmt1P50431 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.61□□□□□ -0.23
Shmt1P50431 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.61□□□□□ -0.23
Shmt1P50431 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Shmt1P50431 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.61□□□□□ -0.23
Shmt1P50431 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shmt1P50431 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shmt1P50431 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shmt1P50431 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.6□□□□□ -0.23
Shmt1P50431 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.6□□□□□ -0.23
Shmt1P50431 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm6023-201ENSMUST00000118217 606 ntBASIC13.6□□□□□ -0.23
Shmt1P50431 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.6□□□□□ -0.23
Shmt1P50431 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.6□□□□□ -0.23
Shmt1P50431 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm9257-201ENSMUST00000221254 232 ntBASIC13.6□□□□□ -0.23
Shmt1P50431 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Shmt1P50431 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Shmt1P50431 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.6□□□□□ -0.23
Shmt1P50431 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shmt1P50431 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shmt1P50431 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.59□□□□□ -0.23
Shmt1P50431 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.59□□□□□ -0.23
Shmt1P50431 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.59□□□□□ -0.23
Shmt1P50431 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.59□□□□□ -0.23
Shmt1P50431 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Shmt1P50431 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Gm13316-201ENSMUST00000140537 691 ntBASIC13.59□□□□□ -0.23
Shmt1P50431 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Gm24548-201ENSMUST00000158650 108 ntBASIC13.59□□□□□ -0.23
Shmt1P50431 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Shmt1P50431 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.59□□□□□ -0.23
Shmt1P50431 Olfr284-202ENSMUST00000206647 966 ntBASIC13.59□□□□□ -0.23
Shmt1P50431 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.59□□□□□ -0.23
Shmt1P50431 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Shmt1P50431 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Shmt1P50431 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shmt1P50431 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Shmt1P50431 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Shmt1P50431 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.58□□□□□ -0.23
Shmt1P50431 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Shmt1P50431 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.58□□□□□ -0.24
Shmt1P50431 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.58□□□□□ -0.24
Shmt1P50431 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Shmt1P50431 Gm13813-201ENSMUST00000120998 787 ntBASIC13.58□□□□□ -0.24
Shmt1P50431 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms