Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Mir1956-201ENSMUST00000157748 65 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm23218-201ENSMUST00000158124 276 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Gm25072-201ENSMUST00000175233 235 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm37028-201ENSMUST00000194276 107 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm17831-201ENSMUST00000205579 900 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm2517-201ENSMUST00000215651 348 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm807-202ENSMUST00000224929 408 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Snora73b-201ENSMUST00000083419 205 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Brca1P48754 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.17□□□□□ -0.14
Brca1P48754 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Brca1P48754 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.17□□□□□ -0.14
Brca1P48754 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.17□□□□□ -0.14
Brca1P48754 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Brca1P48754 Gm25951-201ENSMUST00000175330 64 ntBASIC14.17□□□□□ -0.14
Brca1P48754 Gm9022-201ENSMUST00000182482 992 ntBASIC14.17□□□□□ -0.14
Brca1P48754 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.17□□□□□ -0.14
Brca1P48754 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.17□□□□□ -0.14
Brca1P48754 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Brca1P48754 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Brca1P48754 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.16□□□□□ -0.14
Brca1P48754 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Brca1P48754 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.16□□□□□ -0.14
Brca1P48754 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.16□□□□□ -0.14
Brca1P48754 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.16□□□□□ -0.14
Brca1P48754 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.16□□□□□ -0.14
Brca1P48754 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.16□□□□□ -0.14
Brca1P48754 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.16□□□□□ -0.14
Brca1P48754 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca1P48754 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Brca1P48754 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Brca1P48754 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Brca1P48754 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.16□□□□□ -0.14
Brca1P48754 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Brca1P48754 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm22133-201ENSMUST00000102082 109 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Gm11509-201ENSMUST00000117358 325 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Gm13809-201ENSMUST00000117921 597 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Gm22144-201ENSMUST00000157402 102 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Gm23153-201ENSMUST00000175323 313 ntBASIC14.15□□□□□ -0.14
Brca1P48754 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms