Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.31□□□□□ -0.6
GdnfP48540 Gm5279-201ENSMUST00000199575 745 ntBASIC11.31□□□□□ -0.6
GdnfP48540 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
GdnfP48540 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.31□□□□□ -0.6
GdnfP48540 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.31□□□□□ -0.6
GdnfP48540 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.3□□□□□ -0.6
GdnfP48540 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.3□□□□□ -0.6
GdnfP48540 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
GdnfP48540 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
GdnfP48540 Gm15376-201ENSMUST00000122258 783 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.3□□□□□ -0.6
GdnfP48540 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.3□□□□□ -0.6
GdnfP48540 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
GdnfP48540 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.3□□□□□ -0.6
GdnfP48540 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
GdnfP48540 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.3□□□□□ -0.6
GdnfP48540 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GdnfP48540 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
GdnfP48540 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
GdnfP48540 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.29□□□□□ -0.6
GdnfP48540 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
GdnfP48540 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
GdnfP48540 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
GdnfP48540 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
GdnfP48540 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.29□□□□□ -0.6
GdnfP48540 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.29□□□□□ -0.6
GdnfP48540 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.29□□□□□ -0.6
GdnfP48540 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.29□□□□□ -0.6
GdnfP48540 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.29□□□□□ -0.6
GdnfP48540 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.29□□□□□ -0.6
GdnfP48540 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GdnfP48540 Gm43094-201ENSMUST00000196549 921 ntBASIC11.29□□□□□ -0.6
GdnfP48540 Gm45841-201ENSMUST00000207700 164 ntBASIC11.29□□□□□ -0.6
GdnfP48540 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms