Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfx3P48381 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfx3P48381 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.65□□□□□ -0.54
Rfx3P48381 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.65□□□□□ -0.54
Rfx3P48381 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rfx3P48381 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfx3P48381 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfx3P48381 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfx3P48381 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfx3P48381 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rfx3P48381 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.65□□□□□ -0.55
Rfx3P48381 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.65□□□□□ -0.55
Rfx3P48381 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rfx3P48381 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rfx3P48381 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rfx3P48381 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rfx3P48381 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rfx3P48381 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.65□□□□□ -0.55
Rfx3P48381 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Rfx3P48381 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rfx3P48381 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.64□□□□□ -0.55
Rfx3P48381 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Rfx3P48381 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Rfx3P48381 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
Rfx3P48381 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rfx3P48381 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.64□□□□□ -0.55
Rfx3P48381 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.64□□□□□ -0.55
Rfx3P48381 Mir7654-201ENSMUST00000185082 70 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.64□□□□□ -0.55
Rfx3P48381 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Gm18624-201ENSMUST00000220966 658 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Rfx3P48381 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.64□□□□□ -0.55
Rfx3P48381 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rfx3P48381 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rfx3P48381 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Matn2-203ENSMUST00000226766 3252 ntBASIC11.63□□□□□ -0.55
Rfx3P48381 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.63□□□□□ -0.55
Rfx3P48381 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.63□□□□□ -0.55
Rfx3P48381 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.63□□□□□ -0.55
Rfx3P48381 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.63□□□□□ -0.55
Rfx3P48381 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.63□□□□□ -0.55
Rfx3P48381 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.63□□□□□ -0.55
Rfx3P48381 Gm6983-201ENSMUST00000214912 628 ntBASIC11.63□□□□□ -0.55
Rfx3P48381 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Gm15823-201ENSMUST00000064305 670 ntBASIC11.63□□□□□ -0.55
Rfx3P48381 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.63□□□□□ -0.55
Rfx3P48381 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rfx3P48381 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rfx3P48381 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Rfx3P48381 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms