Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Chd1P40201 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Gm24791-201ENSMUST00000104284 131 ntBASIC18.84■□□□□ 0.61
Chd1P40201 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chd1P40201 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chd1P40201 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Chd1P40201 Gm9916-201ENSMUST00000192943 1228 ntBASIC18.84■□□□□ 0.61
Chd1P40201 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Gm3433-201ENSMUST00000210149 1058 ntBASIC18.84■□□□□ 0.61
Chd1P40201 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chd1P40201 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chd1P40201 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1P40201 Gm14213-201ENSMUST00000119778 768 ntBASIC18.83■□□□□ 0.61
Chd1P40201 Gm42816-201ENSMUST00000198433 325 ntBASIC18.83■□□□□ 0.61
Chd1P40201 Gm29763-201ENSMUST00000205306 616 ntBASIC18.83■□□□□ 0.61
Chd1P40201 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC18.83■□□□□ 0.61
Chd1P40201 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1P40201 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1P40201 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1P40201 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1P40201 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 AC126257.1-201ENSMUST00000213195 1536 ntBASIC18.83■□□□□ 0.6
Chd1P40201 AC130823.1-201ENSMUST00000228929 1549 ntBASIC18.83■□□□□ 0.6
Chd1P40201 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Chd1P40201 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC18.83■□□□□ 0.6
Chd1P40201 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chd1P40201 Gm12453-201ENSMUST00000121981 331 ntBASIC18.83■□□□□ 0.6
Chd1P40201 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC18.83■□□□□ 0.6
Chd1P40201 Gm4811-201ENSMUST00000220879 1220 ntBASIC18.83■□□□□ 0.6
Chd1P40201 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1P40201 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chd1P40201 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chd1P40201 Gm14892-201ENSMUST00000117636 267 ntBASIC18.82■□□□□ 0.6
Chd1P40201 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC18.82■□□□□ 0.6
Chd1P40201 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC18.82■□□□□ 0.6
Chd1P40201 AC164618.2-201ENSMUST00000224770 573 ntBASIC18.82■□□□□ 0.6
Chd1P40201 CT030135.2-201ENSMUST00000225255 893 ntBASIC18.82■□□□□ 0.6
Chd1P40201 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Chd1P40201 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.82■□□□□ 0.6
Chd1P40201 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1P40201 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.81■□□□□ 0.6
Chd1P40201 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC18.81■□□□□ 0.6
Chd1P40201 Gm5638-201ENSMUST00000118618 1258 ntBASIC18.81■□□□□ 0.6
Chd1P40201 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC18.81■□□□□ 0.6
Chd1P40201 Gm10169-201ENSMUST00000121822 348 ntBASIC18.81■□□□□ 0.6
Chd1P40201 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC18.81■□□□□ 0.6
Chd1P40201 Gm25998-201ENSMUST00000175397 53 ntBASIC18.81■□□□□ 0.6
Chd1P40201 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC18.81■□□□□ 0.6
Chd1P40201 Gm44315-201ENSMUST00000203041 219 ntBASIC18.81■□□□□ 0.6
Chd1P40201 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC18.81■□□□□ 0.6
Chd1P40201 AC158388.3-202ENSMUST00000225517 775 ntBASIC18.81■□□□□ 0.6
Chd1P40201 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chd1P40201 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.81■□□□□ 0.6
Chd1P40201 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1P40201 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms