Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Timp3P39876 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Timp3P39876 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.58□□□□□ -0.72
Timp3P39876 Gm27572-201ENSMUST00000183702 255 ntBASIC10.58□□□□□ -0.72
Timp3P39876 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.58□□□□□ -0.72
Timp3P39876 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.58□□□□□ -0.72
Timp3P39876 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
Timp3P39876 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Timp3P39876 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Timp3P39876 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.58□□□□□ -0.72
Timp3P39876 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.57□□□□□ -0.72
Timp3P39876 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.57□□□□□ -0.72
Timp3P39876 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Timp3P39876 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.57□□□□□ -0.72
Timp3P39876 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.57□□□□□ -0.72
Timp3P39876 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Timp3P39876 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Timp3P39876 Gm23931-201ENSMUST00000103842 109 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Gm14350-201ENSMUST00000116642 640 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Gm16202-201ENSMUST00000117532 544 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.57□□□□□ -0.72
Timp3P39876 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Gm19184-201ENSMUST00000196798 928 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms