Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.91□□□□□ -0.02
Traf1P39428 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.91□□□□□ -0.02
Traf1P39428 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.91□□□□□ -0.02
Traf1P39428 Gm38341-201ENSMUST00000195357 515 ntBASIC14.91□□□□□ -0.02
Traf1P39428 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Traf1P39428 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.91□□□□□ -0.02
Traf1P39428 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Traf1P39428 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Traf1P39428 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Traf1P39428 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Traf1P39428 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Traf1P39428 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.91□□□□□ -0.02
Traf1P39428 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Traf1P39428 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Traf1P39428 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Traf1P39428 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Traf1P39428 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Gm15370-201ENSMUST00000117158 253 ntBASIC14.9□□□□□ -0.02
Traf1P39428 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.9□□□□□ -0.02
Traf1P39428 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.9□□□□□ -0.02
Traf1P39428 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.9□□□□□ -0.02
Traf1P39428 Gm45865-201ENSMUST00000211815 945 ntBASIC14.9□□□□□ -0.02
Traf1P39428 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.9□□□□□ -0.02
Traf1P39428 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Traf1P39428 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Traf1P39428 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Traf1P39428 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Traf1P39428 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Traf1P39428 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Traf1P39428 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Traf1P39428 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Traf1P39428 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Traf1P39428 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Gm11222-201ENSMUST00000119005 738 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Gm13350-201ENSMUST00000120519 479 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Traf1P39428 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Gm8738-201ENSMUST00000172606 329 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Gm43758-201ENSMUST00000199500 367 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Gm32025-201ENSMUST00000217960 307 ntBASIC14.89□□□□□ -0.03
Traf1P39428 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Traf1P39428 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Traf1P39428 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Traf1P39428 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Traf1P39428 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Traf1P39428 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Traf1P39428 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Traf1P39428 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Traf1P39428 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Traf1P39428 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms