Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdh4P39038 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdh4P39038 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cdh4P39038 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.35□□□□□ -0.43
Cdh4P39038 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.35□□□□□ -0.43
Cdh4P39038 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdh4P39038 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdh4P39038 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdh4P39038 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdh4P39038 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh4P39038 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cdh4P39038 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Mir686-201ENSMUST00000102174 109 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Mir7085-201ENSMUST00000184353 66 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdh4P39038 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.34□□□□□ -0.43
Cdh4P39038 AY702102-202ENSMUST00000194651 1173 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdh4P39038 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cdh4P39038 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.34□□□□□ -0.43
Cdh4P39038 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdh4P39038 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh4P39038 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdh4P39038 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.33□□□□□ -0.44
Cdh4P39038 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdh4P39038 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cdh4P39038 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdh4P39038 Gm17208-201ENSMUST00000168388 535 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 Gm37042-201ENSMUST00000193816 581 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdh4P39038 Gm4768-201ENSMUST00000206199 686 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 Gm19163-201ENSMUST00000223313 780 ntBASIC12.33□□□□□ -0.44
Cdh4P39038 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Cdh4P39038 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cdh4P39038 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh4P39038 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdh4P39038 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms