Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Upk2P38575 Gm11478-201ENSMUST00000117851 599 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.29□□□□□ -0.6
Upk2P38575 Gm14704-201ENSMUST00000120300 874 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Gm24644-201ENSMUST00000157114 139 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.29□□□□□ -0.6
Upk2P38575 Gm17208-201ENSMUST00000168388 535 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Gm22121-201ENSMUST00000175148 54 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Gm27331-201ENSMUST00000183705 60 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.29□□□□□ -0.6
Upk2P38575 Gm8099-201ENSMUST00000200510 742 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Gm29705-201ENSMUST00000212598 474 ntBASIC11.29□□□□□ -0.6
Upk2P38575 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Upk2P38575 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Upk2P38575 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.28□□□□□ -0.6
Upk2P38575 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.28□□□□□ -0.6
Upk2P38575 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.28□□□□□ -0.6
Upk2P38575 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.28□□□□□ -0.6
Upk2P38575 Gm7561-201ENSMUST00000211203 886 ntBASIC11.28□□□□□ -0.6
Upk2P38575 Gm7653-201ENSMUST00000214567 508 ntBASIC11.28□□□□□ -0.6
Upk2P38575 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Upk2P38575 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.28□□□□□ -0.6
Upk2P38575 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Upk2P38575 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk2P38575 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.28□□□□□ -0.6
Upk2P38575 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Upk2P38575 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.27□□□□□ -0.6
Upk2P38575 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk2P38575 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk2P38575 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk2P38575 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.27□□□□□ -0.6
Upk2P38575 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Upk2P38575 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms