Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Foxa2P35583 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Foxa2P35583 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Foxa2P35583 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.81□□□□□ -0.68
Foxa2P35583 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Gm12291-201ENSMUST00000121627 311 ntBASIC10.81□□□□□ -0.68
Foxa2P35583 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Gm7287-201ENSMUST00000205267 602 ntBASIC10.81□□□□□ -0.68
Foxa2P35583 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.81□□□□□ -0.68
Foxa2P35583 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.81□□□□□ -0.68
Foxa2P35583 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Foxa2P35583 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxa2P35583 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm8805-201ENSMUST00000117848 313 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Gm14928-201ENSMUST00000120198 477 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Gm13123-201ENSMUST00000122173 492 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm23984-201ENSMUST00000157139 203 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Gm45384-201ENSMUST00000210451 277 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.8□□□□□ -0.68
Foxa2P35583 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.8□□□□□ -0.68
Foxa2P35583 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxa2P35583 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms