Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gm37259-201ENSMUST00000193903 849 ntBASIC13.24□□□□□ -0.29
Nfkb1P25799 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Morn2-202ENSMUST00000227729 656 ntBASIC13.24□□□□□ -0.29
Nfkb1P25799 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.24□□□□□ -0.29
Nfkb1P25799 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.23□□□□□ -0.29
Nfkb1P25799 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nfkb1P25799 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.23□□□□□ -0.29
Nfkb1P25799 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nfkb1P25799 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm24255-201ENSMUST00000104481 128 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm8099-201ENSMUST00000200510 742 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.22□□□□□ -0.29
Nfkb1P25799 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms