Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cntn1P12960 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.36□□□□□ -0.43
Cntn1P12960 Mir1247-201ENSMUST00000116706 82 ntBASIC12.36□□□□□ -0.43
Cntn1P12960 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Gm22121-201ENSMUST00000175148 54 ntBASIC12.36□□□□□ -0.43
Cntn1P12960 Mir8109-201ENSMUST00000184375 117 ntBASIC12.36□□□□□ -0.43
Cntn1P12960 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.36□□□□□ -0.43
Cntn1P12960 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.36□□□□□ -0.43
Cntn1P12960 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.36□□□□□ -0.43
Cntn1P12960 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.36□□□□□ -0.43
Cntn1P12960 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.36□□□□□ -0.43
Cntn1P12960 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Cntn1P12960 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cntn1P12960 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cntn1P12960 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Snord83b-201ENSMUST00000104546 94 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.35□□□□□ -0.43
Cntn1P12960 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.35□□□□□ -0.43
Cntn1P12960 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.35□□□□□ -0.43
Cntn1P12960 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.35□□□□□ -0.43
Cntn1P12960 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Gm38158-201ENSMUST00000194617 339 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Gm18584-201ENSMUST00000203098 964 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Olfr284-202ENSMUST00000206647 966 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Gm18935-201ENSMUST00000212692 664 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Gm10608-202ENSMUST00000213924 676 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Cntn1P12960 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.35□□□□□ -0.43
Cntn1P12960 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cntn1P12960 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.35□□□□□ -0.43
Cntn1P12960 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn1P12960 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn1P12960 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn1P12960 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn1P12960 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.34□□□□□ -0.43
Cntn1P12960 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cntn1P12960 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn1P12960 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cntn1P12960 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cntn1P12960 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn1P12960 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Cntn1P12960 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn1P12960 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms