Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lire1P11260 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lire1P11260 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.28□□□□□ -0.44
Lire1P11260 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.28□□□□□ -0.44
Lire1P11260 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lire1P11260 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.28□□□□□ -0.44
Lire1P11260 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lire1P11260 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lire1P11260 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lire1P11260 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Lire1P11260 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lire1P11260 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Lire1P11260 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lire1P11260 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Gm11425-201ENSMUST00000119608 498 ntBASIC12.27□□□□□ -0.45
Lire1P11260 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Gm6244-201ENSMUST00000178732 841 ntBASIC12.27□□□□□ -0.45
Lire1P11260 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lire1P11260 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lire1P11260 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.27□□□□□ -0.45
Lire1P11260 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.27□□□□□ -0.45
Lire1P11260 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.27□□□□□ -0.45
Lire1P11260 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lire1P11260 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Gm9396-201ENSMUST00000076703 567 ntBASIC12.27□□□□□ -0.45
Lire1P11260 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lire1P11260 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.27□□□□□ -0.45
Lire1P11260 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lire1P11260 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lire1P11260 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lire1P11260 Gm15678-201ENSMUST00000117573 960 ntBASIC12.26□□□□□ -0.45
Lire1P11260 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.26□□□□□ -0.45
Lire1P11260 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.26□□□□□ -0.45
Lire1P11260 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.26□□□□□ -0.45
Lire1P11260 Gm6007-201ENSMUST00000208170 823 ntBASIC12.26□□□□□ -0.45
Lire1P11260 Gm18027-201ENSMUST00000218947 619 ntBASIC12.26□□□□□ -0.45
Lire1P11260 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.26□□□□□ -0.45
Lire1P11260 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lire1P11260 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.26□□□□□ -0.45
Lire1P11260 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms