Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm6963-201ENSMUST00000147879 379 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm24749-201ENSMUST00000157838 343 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm24514-201ENSMUST00000174961 285 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Gm5070-201ENSMUST00000177599 862 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Gm5523-201ENSMUST00000180415 997 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccl3P10855 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.33□□□□□ -0.6
Ccl3P10855 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Ccl3P10855 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl3P10855 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccl3P10855 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl3P10855 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.32□□□□□ -0.6
Ccl3P10855 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Gm20426-201ENSMUST00000173657 440 ntBASIC11.32□□□□□ -0.6
Ccl3P10855 Gm7003-201ENSMUST00000195089 312 ntBASIC11.32□□□□□ -0.6
Ccl3P10855 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl3P10855 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccl3P10855 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl3P10855 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl3P10855 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms