Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NclP09405 Gm38000-201ENSMUST00000192390 1215 ntBASIC19.09■□□□□ 0.65
NclP09405 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NclP09405 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NclP09405 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NclP09405 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NclP09405 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NclP09405 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NclP09405 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC19.08■□□□□ 0.65
NclP09405 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NclP09405 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
NclP09405 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NclP09405 Mir877-201ENSMUST00000104738 85 ntBASIC19.08■□□□□ 0.64
NclP09405 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC19.08■□□□□ 0.64
NclP09405 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC19.08■□□□□ 0.64
NclP09405 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC19.08■□□□□ 0.64
NclP09405 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC19.08■□□□□ 0.64
NclP09405 Gm38092-201ENSMUST00000195600 653 ntBASIC19.08■□□□□ 0.64
NclP09405 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NclP09405 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NclP09405 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NclP09405 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Gm15459-201ENSMUST00000117405 1941 ntBASIC19.08■□□□□ 0.64
NclP09405 Gm8355-201ENSMUST00000177767 1941 ntBASIC19.08■□□□□ 0.64
NclP09405 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NclP09405 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Gm18916-201ENSMUST00000198264 1246 ntBASIC19.07■□□□□ 0.64
NclP09405 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC19.07■□□□□ 0.64
NclP09405 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC19.07■□□□□ 0.64
NclP09405 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
NclP09405 Gm6992-201ENSMUST00000217973 1607 ntBASIC19.07■□□□□ 0.64
NclP09405 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
NclP09405 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NclP09405 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
NclP09405 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC19.06■□□□□ 0.64
NclP09405 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NclP09405 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC19.06■□□□□ 0.64
NclP09405 Gm9924-202ENSMUST00000192760 2311 ntBASIC19.06■□□□□ 0.64
NclP09405 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Gm14921-201ENSMUST00000118643 908 ntBASIC19.06■□□□□ 0.64
NclP09405 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NclP09405 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC19.06■□□□□ 0.64
NclP09405 Gm25668-201ENSMUST00000157700 129 ntBASIC19.06■□□□□ 0.64
NclP09405 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Gm26956-201ENSMUST00000182176 986 ntBASIC19.06■□□□□ 0.64
NclP09405 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC19.06■□□□□ 0.64
NclP09405 Gm19963-201ENSMUST00000208413 1255 ntBASIC19.06■□□□□ 0.64
NclP09405 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC19.06■□□□□ 0.64
NclP09405 AC122371.3-201ENSMUST00000223402 1061 ntBASIC19.06■□□□□ 0.64
NclP09405 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC19.06■□□□□ 0.64
NclP09405 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NclP09405 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC19.05■□□□□ 0.64
NclP09405 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms