Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.32□□□□□ -0.6
P04224 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.32□□□□□ -0.6
P04224 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04224 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.32□□□□□ -0.6
P04224 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.32□□□□□ -0.6
P04224 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04224 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04224 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.32□□□□□ -0.6
P04224 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P04224 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.31□□□□□ -0.6
P04224 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.31□□□□□ -0.6
P04224 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.31□□□□□ -0.6
P04224 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P04224 Gm6415-201ENSMUST00000118488 348 ntBASIC11.31□□□□□ -0.6
P04224 Gm15653-201ENSMUST00000119247 907 ntBASIC11.31□□□□□ -0.6
P04224 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P04224 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.31□□□□□ -0.6
P04224 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.31□□□□□ -0.6
P04224 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
P04224 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.31□□□□□ -0.6
P04224 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.31□□□□□ -0.6
P04224 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.31□□□□□ -0.6
P04224 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.31□□□□□ -0.6
P04224 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
P04224 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
P04224 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P04224 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.31□□□□□ -0.6
P04224 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04224 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P04224 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.3□□□□□ -0.6
P04224 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04224 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P04224 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P04224 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.3□□□□□ -0.6
P04224 Gm15393-201ENSMUST00000120499 219 ntBASIC11.3□□□□□ -0.6
P04224 Gm13385-201ENSMUST00000121089 220 ntBASIC11.3□□□□□ -0.6
P04224 Gm14822-201ENSMUST00000122247 291 ntBASIC11.3□□□□□ -0.6
P04224 Gm11594-201ENSMUST00000122313 162 ntBASIC11.3□□□□□ -0.6
P04224 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.3□□□□□ -0.6
P04224 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.3□□□□□ -0.6
P04224 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms