Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.8□□□□□ -0.52
P01852 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.8□□□□□ -0.52
P01852 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.8□□□□□ -0.52
P01852 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
P01852 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.79□□□□□ -0.52
P01852 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.79□□□□□ -0.52
P01852 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.79□□□□□ -0.52
P01852 Gm8805-201ENSMUST00000117848 313 ntBASIC11.79□□□□□ -0.52
P01852 Gm1335-201ENSMUST00000121653 386 ntBASIC11.79□□□□□ -0.52
P01852 Gm16479-201ENSMUST00000121706 932 ntBASIC11.79□□□□□ -0.52
P01852 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.79□□□□□ -0.52
P01852 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.79□□□□□ -0.52
P01852 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Gm27682-201ENSMUST00000183930 110 ntBASIC11.79□□□□□ -0.52
P01852 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.79□□□□□ -0.52
P01852 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.79□□□□□ -0.52
P01852 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.79□□□□□ -0.52
P01852 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.79□□□□□ -0.52
P01852 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
P01852 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.79□□□□□ -0.52
P01852 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01852 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.78□□□□□ -0.52
P01852 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
P01852 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
P01852 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.78□□□□□ -0.52
P01852 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.78□□□□□ -0.52
P01852 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.78□□□□□ -0.52
P01852 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.78□□□□□ -0.52
P01852 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.78□□□□□ -0.52
P01852 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.78□□□□□ -0.52
P01852 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.78□□□□□ -0.52
P01852 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Gm10268-201ENSMUST00000085340 555 ntBASIC11.78□□□□□ -0.52
P01852 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.78□□□□□ -0.52
P01852 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P01852 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.78□□□□□ -0.52
P01852 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P01852 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms