Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.16□□□□□ -0.78
P01788 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.16□□□□□ -0.78
P01788 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P01788 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.16□□□□□ -0.78
P01788 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.16□□□□□ -0.78
P01788 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.16□□□□□ -0.78
P01788 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P01788 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P01788 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.15□□□□□ -0.78
P01788 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
P01788 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.15□□□□□ -0.78
P01788 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.15□□□□□ -0.78
P01788 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
P01788 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.15□□□□□ -0.78
P01788 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
P01788 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
P01788 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.15□□□□□ -0.78
P01788 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.15□□□□□ -0.78
P01788 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.15□□□□□ -0.78
P01788 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
P01788 Gm27838-201ENSMUST00000184829 128 ntBASIC10.15□□□□□ -0.78
P01788 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
P01788 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.15□□□□□ -0.78
P01788 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.15□□□□□ -0.78
P01788 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P01788 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.15□□□□□ -0.79
P01788 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
P01788 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
P01788 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.15□□□□□ -0.79
P01788 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
P01788 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.15□□□□□ -0.79
P01788 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.14□□□□□ -0.79
P01788 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.14□□□□□ -0.79
P01788 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
P01788 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.14□□□□□ -0.79
P01788 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
P01788 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
P01788 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
P01788 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms