Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
CcnkO88874 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.5□□□□□ -0.57
CcnkO88874 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.5□□□□□ -0.57
CcnkO88874 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Gm20445-201ENSMUST00000061905 565 ntBASIC11.5□□□□□ -0.57
CcnkO88874 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CcnkO88874 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.5□□□□□ -0.57
CcnkO88874 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CcnkO88874 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CcnkO88874 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.5□□□□□ -0.57
CcnkO88874 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CcnkO88874 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcnkO88874 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.5□□□□□ -0.57
CcnkO88874 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CcnkO88874 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CcnkO88874 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CcnkO88874 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CcnkO88874 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Gm14719-201ENSMUST00000121891 340 ntBASIC11.49□□□□□ -0.57
CcnkO88874 Gm15487-201ENSMUST00000122373 465 ntBASIC11.49□□□□□ -0.57
CcnkO88874 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.49□□□□□ -0.57
CcnkO88874 Gm29667-201ENSMUST00000190817 490 ntBASIC11.49□□□□□ -0.57
CcnkO88874 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.49□□□□□ -0.57
CcnkO88874 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CcnkO88874 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.49□□□□□ -0.57
CcnkO88874 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.49□□□□□ -0.57
CcnkO88874 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CcnkO88874 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcnkO88874 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
CcnkO88874 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Gm15770-201ENSMUST00000117498 584 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Gm12151-201ENSMUST00000121374 290 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.48□□□□□ -0.57
CcnkO88874 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
CcnkO88874 Gm24694-201ENSMUST00000180054 110 ntBASIC11.48□□□□□ -0.57
CcnkO88874 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Gm27663-201ENSMUST00000184839 110 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CcnkO88874 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CcnkO88874 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms