Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Alx3O70137 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Alx3O70137 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.86□□□□□ -0.51
Alx3O70137 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.86□□□□□ -0.51
Alx3O70137 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.86□□□□□ -0.51
Alx3O70137 Gm14057-201ENSMUST00000120631 482 ntBASIC11.86□□□□□ -0.51
Alx3O70137 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Alx3O70137 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.86□□□□□ -0.51
Alx3O70137 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Gm28760-201ENSMUST00000185995 736 ntBASIC11.86□□□□□ -0.51
Alx3O70137 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.86□□□□□ -0.51
Alx3O70137 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.86□□□□□ -0.51
Alx3O70137 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Alx3O70137 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.86□□□□□ -0.51
Alx3O70137 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx3O70137 Gm8872-201ENSMUST00000197475 1341 ntBASIC11.86□□□□□ -0.51
Alx3O70137 Syt7-204ENSMUST00000223586 1344 ntBASIC11.86□□□□□ -0.51
Alx3O70137 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.85□□□□□ -0.51
Alx3O70137 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Gm15171-201ENSMUST00000122191 334 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Gm15376-201ENSMUST00000122258 783 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.85□□□□□ -0.51
Alx3O70137 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Gm37533-201ENSMUST00000193848 545 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Gm19931-201ENSMUST00000198920 368 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.85□□□□□ -0.51
Alx3O70137 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 AC159205.7-201ENSMUST00000225988 692 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Alx3O70137 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Alx3O70137 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Alx3O70137 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx3O70137 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.85□□□□□ -0.51
Alx3O70137 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Alx3O70137 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx3O70137 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx3O70137 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx3O70137 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms