Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Npc1O35604 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Npc1O35604 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Npc1O35604 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Npc1O35604 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Npc1O35604 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Gm5187-201ENSMUST00000117317 991 ntBASIC12.58□□□□□ -0.4
Npc1O35604 Gm8805-201ENSMUST00000117848 313 ntBASIC12.58□□□□□ -0.4
Npc1O35604 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.58□□□□□ -0.4
Npc1O35604 Gm16479-201ENSMUST00000121706 932 ntBASIC12.58□□□□□ -0.4
Npc1O35604 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.58□□□□□ -0.4
Npc1O35604 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.58□□□□□ -0.4
Npc1O35604 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.58□□□□□ -0.4
Npc1O35604 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Npc1O35604 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Npc1O35604 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Npc1O35604 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Npc1O35604 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.57□□□□□ -0.4
Npc1O35604 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.57□□□□□ -0.4
Npc1O35604 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Gm13392-201ENSMUST00000117708 150 ntBASIC12.57□□□□□ -0.4
Npc1O35604 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.57□□□□□ -0.4
Npc1O35604 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.57□□□□□ -0.4
Npc1O35604 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.57□□□□□ -0.4
Npc1O35604 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Npc1O35604 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Npc1O35604 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Npc1O35604 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.56□□□□□ -0.4
Npc1O35604 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.56□□□□□ -0.4
Npc1O35604 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.56□□□□□ -0.4
Npc1O35604 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Npc1O35604 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npc1O35604 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms