Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC19.42■□□□□ 0.7
Polr1aO35134 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC19.42■□□□□ 0.7
Polr1aO35134 Gm2965-201ENSMUST00000198365 343 ntBASIC19.42■□□□□ 0.7
Polr1aO35134 Gm4157-201ENSMUST00000211647 679 ntBASIC19.42■□□□□ 0.7
Polr1aO35134 AC154290.1-201ENSMUST00000223786 1240 ntBASIC19.42■□□□□ 0.7
Polr1aO35134 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Polr1aO35134 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Polr1aO35134 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Polr1aO35134 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Polr1aO35134 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Polr1aO35134 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Polr1aO35134 Gm12029-201ENSMUST00000120073 832 ntBASIC19.41■□□□□ 0.7
Polr1aO35134 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.41■□□□□ 0.7
Polr1aO35134 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Polr1aO35134 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC19.41■□□□□ 0.7
Polr1aO35134 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Gm26448-201ENSMUST00000082446 203 ntBASIC19.41■□□□□ 0.7
Polr1aO35134 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Polr1aO35134 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Polr1aO35134 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr1aO35134 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Polr1aO35134 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Polr1aO35134 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Polr1aO35134 Gm15595-201ENSMUST00000120840 961 ntBASIC19.4■□□□□ 0.7
Polr1aO35134 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC19.4■□□□□ 0.7
Polr1aO35134 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Polr1aO35134 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC19.4■□□□□ 0.7
Polr1aO35134 AC129219.2-201ENSMUST00000224324 701 ntBASIC19.4■□□□□ 0.7
Polr1aO35134 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Gm9785-201ENSMUST00000062642 1006 ntBASIC19.4■□□□□ 0.7
Polr1aO35134 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.4■□□□□ 0.7
Polr1aO35134 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC19.4■□□□□ 0.7
Polr1aO35134 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Polr1aO35134 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Polr1aO35134 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Polr1aO35134 Gm13809-201ENSMUST00000117921 597 ntBASIC19.39■□□□□ 0.7
Polr1aO35134 Gm11511-201ENSMUST00000118146 540 ntBASIC19.39■□□□□ 0.7
Polr1aO35134 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Gm8100-201ENSMUST00000182906 988 ntBASIC19.39■□□□□ 0.7
Polr1aO35134 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC19.39■□□□□ 0.7
Polr1aO35134 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
Polr1aO35134 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Polr1aO35134 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Polr1aO35134 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Polr1aO35134 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Polr1aO35134 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Polr1aO35134 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Polr1aO35134 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Polr1aO35134 Gm7049-201ENSMUST00000223520 1712 ntBASIC19.39■□□□□ 0.69
Polr1aO35134 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms