Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Gm20445-201ENSMUST00000061905 565 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh1F7BJK1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Mir686-201ENSMUST00000102174 109 ntBASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh1F7BJK1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdh1F7BJK1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdh1F7BJK1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.58□□□□□ -0.55
Pcdh1F7BJK1 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.58□□□□□ -0.55
Pcdh1F7BJK1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms