Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm22058-201ENSMUST00000083393 310 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm19459-201ENSMUST00000176240 835 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm27438-201ENSMUST00000183480 110 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.53□□□□□ -0.56
Shank1D3YZU1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shank1D3YZU1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.52□□□□□ -0.56
Shank1D3YZU1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Gm10051-201ENSMUST00000145209 414 ntBASIC11.52□□□□□ -0.56
Shank1D3YZU1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.52□□□□□ -0.56
Shank1D3YZU1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.52□□□□□ -0.56
Shank1D3YZU1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shank1D3YZU1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Gm11628-201ENSMUST00000117568 171 ntBASIC11.52□□□□□ -0.57
Shank1D3YZU1 Gm13736-201ENSMUST00000119272 253 ntBASIC11.52□□□□□ -0.57
Shank1D3YZU1 Gm37201-201ENSMUST00000191845 523 ntBASIC11.52□□□□□ -0.57
Shank1D3YZU1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.52□□□□□ -0.57
Shank1D3YZU1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms