Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Gm12742-201ENSMUST00000117326 410 ntBASIC12.99□□□□□ -0.33
Rrn3B2RS91 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Gm26185-201ENSMUST00000157692 266 ntBASIC12.99□□□□□ -0.33
Rrn3B2RS91 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Gm28693-202ENSMUST00000190758 331 ntBASIC12.99□□□□□ -0.33
Rrn3B2RS91 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.99□□□□□ -0.33
Rrn3B2RS91 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.99□□□□□ -0.33
Rrn3B2RS91 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Gm10146-201ENSMUST00000072739 309 ntBASIC12.99□□□□□ -0.33
Rrn3B2RS91 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrn3B2RS91 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rrn3B2RS91 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm1335-201ENSMUST00000121653 386 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm10268-201ENSMUST00000085340 555 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.98□□□□□ -0.33
Rrn3B2RS91 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rrn3B2RS91 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.97□□□□□ -0.33
Rrn3B2RS91 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.97□□□□□ -0.33
Rrn3B2RS91 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.97□□□□□ -0.33
Rrn3B2RS91 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.97□□□□□ -0.33
Rrn3B2RS91 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrn3B2RS91 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms