Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm8566-201ENSMUST00000120174 465 ntBASIC16.21■□□□□ 0.19
Scn7aB1AYL1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm9540-201ENSMUST00000188230 478 ntBASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn7aB1AYL1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Gm9062-201ENSMUST00000117712 727 ntBASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Gm10774-201ENSMUST00000188689 204 ntBASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Gm44980-201ENSMUST00000205826 314 ntBASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Gm4157-201ENSMUST00000211647 679 ntBASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn7aB1AYL1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Gm44999-201ENSMUST00000207456 1493 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Mir7677-201ENSMUST00000184226 67 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Gm8956-201ENSMUST00000203939 825 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Gm44882-201ENSMUST00000205702 802 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn7aB1AYL1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Gm13809-201ENSMUST00000117921 597 ntBASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn7aB1AYL1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms