Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.4□□□□□ -0.74
Gm12887B1AVM1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.4□□□□□ -0.74
Gm12887B1AVM1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Gm12887B1AVM1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.4□□□□□ -0.75
Gm12887B1AVM1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm22065-201ENSMUST00000103753 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm22066-201ENSMUST00000103761 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24932-201ENSMUST00000103763 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24115-201ENSMUST00000103799 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm22190-201ENSMUST00000103827 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm22191-201ENSMUST00000103831 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24721-201ENSMUST00000103849 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm28018-201ENSMUST00000103869 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm26399-201ENSMUST00000103937 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm25349-201ENSMUST00000177728 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm23616-201ENSMUST00000177797 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm25871-201ENSMUST00000177816 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24752-201ENSMUST00000178240 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24496-201ENSMUST00000178287 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm25649-201ENSMUST00000178476 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm25548-201ENSMUST00000178681 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm23147-201ENSMUST00000178841 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm26095-201ENSMUST00000179270 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm22171-201ENSMUST00000179283 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm23936-201ENSMUST00000179354 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm22619-201ENSMUST00000179516 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm25255-201ENSMUST00000179579 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24755-201ENSMUST00000179691 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm26506-201ENSMUST00000179692 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm25086-201ENSMUST00000179931 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm23243-201ENSMUST00000180047 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24659-201ENSMUST00000180212 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm24169-201ENSMUST00000180244 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm23689-201ENSMUST00000180354 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm27533-201ENSMUST00000183800 152 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm27359-201ENSMUST00000184153 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm27785-201ENSMUST00000184268 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm27466-201ENSMUST00000184396 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm27703-201ENSMUST00000184836 110 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms