Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm13809-201ENSMUST00000117921 597 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm14724-201ENSMUST00000118400 537 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm15573-201ENSMUST00000119487 540 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm12164-201ENSMUST00000121695 551 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm9463-201ENSMUST00000206707 601 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col4a6B1AVK5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Gm12899-201ENSMUST00000120565 551 ntBASIC12.96□□□□□ -0.34
Col4a6B1AVK5 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Gm22144-201ENSMUST00000157402 102 ntBASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col4a6B1AVK5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Gm12857-201ENSMUST00000117678 592 ntBASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Gm6905-201ENSMUST00000205729 511 ntBASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Gm4157-201ENSMUST00000211647 679 ntBASIC12.95□□□□□ -0.34
Col4a6B1AVK5 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms