Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.6□□□□□ -0.39
Chd3B1AR17 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Gm38092-201ENSMUST00000195600 653 ntBASIC12.6□□□□□ -0.39
Chd3B1AR17 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.6□□□□□ -0.39
Chd3B1AR17 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chd3B1AR17 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.6□□□□□ -0.39
Chd3B1AR17 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chd3B1AR17 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd3B1AR17 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Gm14381-201ENSMUST00000122105 414 ntBASIC12.59□□□□□ -0.39
Chd3B1AR17 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.59□□□□□ -0.39
Chd3B1AR17 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.59□□□□□ -0.39
Chd3B1AR17 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd3B1AR17 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Chd3B1AR17 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Chd3B1AR17 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Chd3B1AR17 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Gm13492-201ENSMUST00000119772 665 ntBASIC12.58□□□□□ -0.39
Chd3B1AR17 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Gm37489-201ENSMUST00000191883 159 ntBASIC12.58□□□□□ -0.39
Chd3B1AR17 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.58□□□□□ -0.39
Chd3B1AR17 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.58□□□□□ -0.39
Chd3B1AR17 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd3B1AR17 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Chd3B1AR17 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.58□□□□□ -0.4
Chd3B1AR17 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Chd3B1AR17 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.58□□□□□ -0.4
Chd3B1AR17 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.58□□□□□ -0.4
Chd3B1AR17 Mospd4-201ENSMUST00000180618 576 ntBASIC12.58□□□□□ -0.4
Chd3B1AR17 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.58□□□□□ -0.4
Chd3B1AR17 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd3B1AR17 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd3B1AR17 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms